BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B10LP1|AL427723
(1031 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 1102 0.0
3x_Contig1383 496 e-140
>3x_Contig1145
Length = 5226
Score = 1102 bits (555), Expect = 0.0
Identities = 558/560 (99%)
Strand = Plus / Plus
Query: 1 gatctaaatgagagtntagaaatgatgaaacaggaacaagctattcccgaatacgaaatt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4667 gatctaaatgagagtatagaaatgatgaaacaggaacaagctattcccgaatacgaaatt 4726
Query: 61 cagacccgtgagaagtccatggcaaacctggaatcaaaattgamacaatgccagtcgtta 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4727 cagacccgtgagaagtccatggcaaacctggaatcaaaattgaaacaatgccagtcgtta 4786
Query: 121 aatatcgagacaacccgcgacaccgatgcagctacccaatcatcattgctgccgcagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4787 aatatcgagacaacccgcgacaccgatgcagctacccaatcatcattgctgccgcagcaa 4846
Query: 181 caacagcgtggcgattccttcgatttggacatcgaggcaactgcaggcaccgaccaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4847 caacagcgtggcgattccttcgatttggacatcgaggcaactgcaggcaccgaccaatca 4906
Query: 241 gacgcggcaaaccacgacgccgtacaggagcaattactccgtgaacaagacaatcaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4907 gacgcggcaaaccacgacgccgtacaggagcaattactccgtgaacaagacaatcaattg 4966
Query: 301 gacatgattcaccagacaatgcaaaacattcatctacaggcatctacaatgggtcaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4967 gacatgattcaccagacaatgcaaaacattcatctacaggcatctacaatgggtcaagaa 5026
Query: 361 ctaacagaacagggcatgattctcgaagaaatggacggaaatgtcgacggagtcatgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5027 ctaacagaacagggcatgattctcgaagaaatggacggaaatgtcgacggagtcatgaac 5086
Query: 421 aaactttccagaggaagacgacaactagaatgggtctacgaacacaacaaagaacgtgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5087 aaactttccagaggaagacgacaactagaatgggtctacgaacacaacaaagaacgtgtc 5146
Query: 481 aacgactgctgcatctttctcttaatcattgcattgatcatcctactagtactagcattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5147 aacgactgctgcatctttctcttaatcattgcattgatcatcctactagtactagcattc 5206
Query: 541 attttgtgatgtatatcacc 560
||||||||||||||||||||
Sbjct: 5207 attttgtgatgtatatcacc 5226
>3x_Contig1383
Length = 6139
Score = 496 bits (250), Expect = e-140
Identities = 265/268 (98%), Gaps = 2/268 (0%)
Strand = Plus / Plus
Query: 765 acaacatacgacagcggctttgaaatcgtaccacaatggagctttcgaactgattttttt 824
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 acaacatacgacagcggctttgaaatcgtac-acaatggagctttcgaactgattttttt 63
Query: 825 gttgaaatatatagaaagtatggaaactgagaaatggaaaagtattaagaccaagttagt 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gttgaaatatatagaaagtatggaaactgagaaatggaaaagtattaagaccaagttagt 123
Query: 885 ttttaaggtacaaaagcaaaaggttgcttgctggattgggttttttgcacgtcaagctac 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttttaaggtacaaaagcaaaaggttgcttgctggattgggttttttgcacgtcaagctac 183
Query: 945 agtgtcagatccaagactatcgaagagagcgatttcatttaagaggcgaagggcactagg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 agtgtcagatccaagactatcgaagagagcgatttcatttaagaggcgaagggcactagg 243
Query: 1005 attaggacggrgttgat-atacttactg 1031
|||||||||| |||||| ||||||||||
Sbjct: 244 attaggacggagttgataatacttactg 271
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7112
Number of Sequences: 1807
Number of extensions: 7112
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 1031
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1015
effective length of database: 10,329,639
effective search space: 10484583585
effective search space used: 10484583585
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)